Bioconductor Multi-mapped reads

Showing : multi-mapped reads • reset

8

votes

1

reply

4.4k

views

limma rna-seq multi-mapped reads normalization microbiome

updated 9.1 years ago by Steve Lianoglou ★ 13k • written 9.1 years ago by tealfurn ▴ 30

0

votes

1

reply

2.5k

views

rnaseq multi-mapped reads ballgown salmon timecourse

10.3 years ago friederike.mgh • 0

2 results • Page 1 of 1

Recent ...

Replies

Comment: Save the Date for EuroBioC2026 in Turku! by jamesbennettki • 0

That sounds amazing I have always wanted to visit Finland and meet others in the Bioconductor community Events like EuroBioC2026 inspire me…

Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k

This should now be resolved

Answer: Question about collapsing ASVs by genus level during DESeq2 analysis by Michael Love 43k

I'll just note that microbiome stats folks tend to use other tools than DESeq2. > several ASVs belong to the same genus but are not iden…

Answer: Integration: Paired-end vs healthy single-end from a different source by James W. MacDonald 68k

If by reprocess you mean generate libraries and re-sequence, then that's something you could do. Otherwise the biological and technical dif…

Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112

Votes

Bioconductor 3.22 Released!

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

Awards • All

Popular Question to Daniel Cameron ▴ 40

Popular Question to Peter Hickey ▴ 760

Popular Question to edward.esiribloom • 0

Popular Question to Fred Hutch (Recruiting) ▴ 40